Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815992.1_cds_XP_016498594.1_12606
CDS Infomation

[gene=LOC107817306] [db_xref=GeneID:107817306] [protein=endoglucanase 3-like] [protein_id=XP_016498594.1] [location=join(29241..29459,30079..30582,31673..31822,31951..32062,32153..32316,32494..32823)] [gbkey=CDS]
Sequence

ATGGCGTTTAGAGTGAAAGTTTCTGTTTGCATCATTCTCTTCTTGTCCTTCTCATCATTC
TTCTTCTCATTGGGTACTGCCCAAGGGGGTTTCAACTATAGAGAAGCTCTTGAAAAGTCC
ATTTTGTTCTTTGAAGGACAAAGATCAGGGAAACTTCCCCCTAACCAGCGTGTCTCTTGG
AGGGGTAGTTCGGGACTTTCAGATGGTTCACTTGCTAAAGTGGACTTAACTGGAGGCTAT
TATGATGCTGGAGACAATGTCAAGTTCAATTTCCCAATGGCATACACTACCACAATGCTC
TCTTGGAACACACTTGAGTATGGCAAGAGAATGGGGCCCCAATTGCAAAATGCACGGGCC
GCTATACGTTGGGCCACCGATTACTTCCTCAAATGTGCAAATGCTGCGCCCAACAAGCTC
TTCGTTGGCGTTGGCGATCCAAATGCTGATCACAAGTGTTGGGAAAGGCCTGAAGATATG
GATACTGTCCGGAGTGTCTATTATGTCTCTCCGAGCAGTCCTGGTTCCGACGTGGCCGGA
GAAATGGCCGCTGCTTTAGCTGCTGCCTCATTAGTTTTCCGGACGGTTGATCCGGTGTAC
TCAAAAAAGCTACTGGGAAATGCAGTGAAAGTGTTTAGATTTGCAGTTCAATTCAGAGGC
TCCTATAGTGATTCACTAGGCTCTGCAGCTTGCCCATTCTATTGCTCATACTCTGGTTAT
AAGGATGAGCTATATTGGGGAGCGGCATGGCTATTGAGAGCAACAAATGATATTTCATAC
TTAAACTTCATAAACACATTGGGAGTCAATGATGTACCAGACTTATTTAGCTGGGACAAC
AAGTATGCTGGTGCTCATGTTCTTATGGCAAGGAGAAGCGTTGTTGGAAATGACAAAAGG
TTTGATTCATTCAGACAACAGGCTGAAAACTTTGTTTGCAAAATATTACCCAACTCACCT
TATACAAGCACCCAATATACAAAAGGGGGCCTAATTTACAAGCTACCTGAAGAAAATCTT
CAATATGTGACATCCATCACATCTTTGCTTACCACTTATGCCAAATACATGGCAAGTAAA
AAGCACACTTTCAACTGTGGAAGCCTCTTGGTCACAGAAAAGACCATTAGAATACTTGCA
AAAAGACAGGTGGACTATATATTAGGTAACAATCCAATGAAAATGTCATACATGGTAGGC
TATGGAACAAATTACCCTCGAAGAGTTCACCACAGAGGATCATCTTTACCTTCAATGGCA
ATGCATCCACAGTCATTTGGTTGTGATGGTGGATTTCAACCATACTATTATACAGCAAAT
GCCAACCCAAACATTTTGGTTGGAGCAATTGTTGGAGGTCCTAATCAAAATGATTTCTTC
CCGGATGAACGTACAGATTATAGTCATTCAGAGCCTGCTACTTATATTAATGCTGCCATT
GTTGGACCTCTAGCATACTTTGATAGTTCCGAACGTTAG

Peptide Sequence

PEP ID

XP_016498594.1
PEP Infomation

PREDICTED: endoglucanase 3-like [Nicotiana tabacum]
Sequence

MAFRVKVSVCIILFLSFSSFFFSLGTAQGGFNYREALEKSILFFEGQRSGKLPPNQRVSW
RGSSGLSDGSLAKVDLTGGYYDAGDNVKFNFPMAYTTTMLSWNTLEYGKRMGPQLQNARA
AIRWATDYFLKCANAAPNKLFVGVGDPNADHKCWERPEDMDTVRSVYYVSPSSPGSDVAG
EMAAALAAASLVFRTVDPVYSKKLLGNAVKVFRFAVQFRGSYSDSLGSAACPFYCSYSGY
KDELYWGAAWLLRATNDISYLNFINTLGVNDVPDLFSWDNKYAGAHVLMARRSVVGNDKR
FDSFRQQAENFVCKILPNSPYTSTQYTKGGLIYKLPEENLQYVTSITSLLTTYAKYMASK
KHTFNCGSLLVTEKTIRILAKRQVDYILGNNPMKMSYMVGYGTNYPRRVHHRGSSLPSMA
MHPQSFGCDGGFQPYYYTANANPNILVGAIVGGPNQNDFFPDERTDYSHSEPATYINAAI
VGPLAYFDSSER

Transcript Sequence

Gene sequence data has not been registered.